BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039G09SP1|AL430756
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig720 1861 0.0
3x_Contig587 161 3e-39
3x_Contig1044 155 2e-37
3x_Contig1798 151 2e-36
3x_Contig1347 145 2e-34
3x_Contig1020 145 2e-34
3x_Contig848 145 2e-34
3x_Contig1 137 4e-32
3x_Contig537 111 2e-24
>3x_Contig720
Length = 2178
Score = 1861 bits (937), Expect = 0.0
Identities = 949/953 (99%), Gaps = 1/953 (0%)
Strand = Plus / Plus
Query: 1 atcctcgaaacaatggaattcaagcttagaagagagagtattttagttaattgaatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 atcctcgaaacaatggaattcaagcttagaagagagagtattttagttaattgaatgttg 1123
Query: 61 ttgcttgtcaattagactgtagtgaataaagaatctagatatagatgagatgagatgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 ttgcttgtcaattagactgtagtgaataaagaatctagatatagatgagatgagatgagc 1183
Query: 121 tgaaaattttcaaaagctgatatttcaatttttgcaaaarttctttcttttctttttcac 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1184 tgaaaattttcaaaagctgatatttcaatttttgcaaaagttctttcttttctttttcac 1243
Query: 181 cacgtccgtttgatattcctcgcaagtcacgtgagaaaaaagagaagaatgatgaattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 cacgtccgtttgatattcctcgcaagtcacgtgagaaaaaagagaagaatgatgaattat 1303
Query: 241 tattattattattatcacatgacgaccgtctctgatgtgagtwagcaaaggactccacca 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1304 tattattattattatcacatgacgaccgtctctgatgtgagtcagcaaaggactccacca 1363
Query: 301 gacatcaattctgccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 gacatcaattctgccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggtt 1423
Query: 361 gggggttcgagccccccacagggctttctttttacccccctcatttttcctttttttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 gggggttcgagccccccacagggctttctttttacccccctcatttttcctttttttcca 1483
Query: 421 tcaaccatttctccgtcattcgaagcatcaacttcaaattctggccgccagtaacaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 tcaaccatttctccgtcattcgaagcatcaacttcaaattctggccgccagtaacaataa 1543
Query: 481 aaaaaaagatcaacacactaagaatggaaagagctccaaatataaaaccacccacggctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 aaaaaaagatcaacacactaagaatggaaagagctccaaatataaaaccacccacggctt 1603
Query: 541 aaccaaaacaatacatgttactgaattcttttctgtaccaataaggcaaatgtttccccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 aaccaaaacaatacatgttactgaattcttttctgtaccaataaggcaaatgtttccccc 1663
Query: 601 aacacttcgcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtccca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 aacacttcgcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtccca 1723
Query: 661 gcaacatttaaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 gcaacatttaaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaat 1783
Query: 721 ctagaactaaaagttactgctgaactggtctttcttggaagaagaacactcacaaactga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 ctagaactaaaagttactgctgaactggtctttcttggaagaagaacactcacaaactga 1843
Query: 781 gtagtgcaggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 gtagtgcaggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagca 1903
Query: 841 aacagatgaacaccttccatctacactaaggtacatcgcatattcccgtattttcaaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1904 aacagatgaacaccttccatctacactaaggtacatcgcatattcccgtattttcaaaca 1963
Query: 901 atttyccaaatcgcttctcgttttccgttttgctaa-cccagcagtatgcggt 952
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1964 atttcccaaatcgcttctcgttttccgttttgctaaccccagcagtatgcggt 2016
>3x_Contig587
Length = 1528
Score = 161 bits (81), Expect = 3e-39
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 197
Query: 373 cccccacagggctttcttttt 393
|||||||||||||||||||||
Sbjct: 196 cccccacagggctttcttttt 176
>3x_Contig1044
Length = 4552
Score = 155 bits (78), Expect = 2e-37
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 312 tgccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgag 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3551 tgccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgag 3610
Query: 372 ccccccacagggctttcttttt 393
|||||||||||||||| |||||
Sbjct: 3611 ccccccacagggctttattttt 3632
>3x_Contig1798
Length = 38968
Score = 151 bits (76), Expect = 2e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32032 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 31973
Query: 373 cccccacagggctttc 388
||||||||||||||||
Sbjct: 31972 cccccacagggctttc 31957
>3x_Contig1347
Length = 6130
Score = 145 bits (73), Expect = 2e-34
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 gccttgctggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 4670
Query: 373 cccccacagggctttcttttt 393
||||| |||||||||||||||
Sbjct: 4669 cccccgcagggctttcttttt 4649
>3x_Contig1020
Length = 4879
Score = 145 bits (73), Expect = 2e-34
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3621 gccttgctggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 3562
Query: 373 cccccacagggctttcttttt 393
||||| |||||||||||||||
Sbjct: 3561 cccccgcagggctttcttttt 3541
>3x_Contig848
Length = 3091
Score = 145 bits (73), Expect = 2e-34
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 gccttgctggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 1023
Query: 373 cccccacagggctttcttttt 393
||||| |||||||||||||||
Sbjct: 1022 cccccgcagggctttcttttt 1002
>3x_Contig1
Length = 735
Score = 137 bits (69), Expect = 4e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 313 gccttgttggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 372
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gccttgctggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagc 257
Query: 373 cccccacagggctttcttttt 393
||||| ||||||||| |||||
Sbjct: 258 cccccgcagggctttgttttt 278
>3x_Contig537
Length = 3151
Score = 111 bits (56), Expect = 2e-24
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 320 tggcgcaatcggtagcgcgtgtgactcttaatcacaaggttgggggttcgagccccccac 379
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 3084 tggcgcaatcggtagcgcgtgtgactcttaatcacaaggtt-ggggttcgagccccccgc 3026
Query: 380 agggctttctttttac 395
||||||| |||||||
Sbjct: 3025 agggcttgttttttac 3010
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,454
Number of Sequences: 1807
Number of extensions: 11454
Number of successful extensions: 659
Number of sequences better than 1.0e-20: 9
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)